BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028E02SP1|AL428911
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1695 1714 0.0
>3x_Contig1695
Length = 14630
Score = 1714 bits (864), Expect = 0.0
Identities = 875/878 (99%), Gaps = 1/878 (0%)
Strand = Plus / Minus
Query: 1 atctatcgagtccccataccctaagaaactcgggtcctcattcgaaatcatcaaattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5185 atctatcgagtccccataccctaagaaactcgggtcctcattcgaaatcatcaaattcag 5126
Query: 61 agacttaaccaatgggtatcaatctgacactcccgatcacatccctgaactagcatcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5125 agacttaaccaatgggtatcaatctgacactcccgatcacatccctgaactagcatcaga 5066
Query: 121 cccgtcttcacagatgatcacctgcgaaatgctattagtcgagcagccaacgagtagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5065 cccgtcttcacagatgatcacctgcgaaatgctattagtcgagcagccaacgagtagagt 5006
Query: 181 cagattcacaattagaggttcaggaactgaacggaa-ttgaaagtatacattgaagcacg 239
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 5005 cagattcacaattagaggttcaggaactgaaccgaaattgaaagtatacattgaagcacg 4946
Query: 240 tacaaatacagaaccgaattcgatagccttagcgaagttcacatgggatgtgctaagaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4945 tacaaatacagaaccgaattcgatagccttagcgaagttcacatgggatgtgctaagaca 4886
Query: 300 agaatggtttaaaccagaactcactggactcctcacaccattccaatgagcatctgttat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4885 agaatggtttaaaccagaactcactggactcctcacaccattccaatgagcatctgttat 4826
Query: 360 cattatttgaaaagtgaccacgtgaccacatagaggaaaagaaactgaaaaaagttttcg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4825 cattatttgaaaagtgaccacgtgaccacatagaggaaaagaaactgaaaaaagttttcg 4766
Query: 420 ccttacgaatgagacgatgagaagggtaagaattgatgaatcatttagtcaccagatagt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4765 ccttacgaatgagacgatgagaagggtaagaattgatgaatcatttagtcaccagatagt 4706
Query: 480 actttcaaaccaatttttacagcctgtgttgtagaggattggtgcactacagtgacaaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4705 actttcaaaccaatttttacagcctgtgttgtagaggattggtgcactacagtgacaaac 4646
Query: 540 caggtgtactgtcagtgcgtgtgttattattatgagagttcctatcaagaagtactttga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4645 caggtgtactgtcagtgcgtgtgttattattatgagagttcctatcaagaagtactttga 4586
Query: 600 agagaacccagatgtcgttttagttatggatggtggtcaagggaccgaattggaaaatcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4585 agagaacccagatgtcgttttagttatggatggtggtcaagggaccgaattggaaaatcg 4526
Query: 660 gggaatcaacgttgcgaacccggtatggtctacggtgccgtttattaatgagtcgttttg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4525 gggaatcaacgttgcgaacccggtatggtctacggtgccgtttattaatgagtcgttttg 4466
Query: 720 gtctagcgatgcttcgaaggatcgtattattgtaaaacaaatgtttgaggatttcattga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4465 gtctagcgatgcttcgaaggatcgtattattgtaaaacaaatgtttgaggatttcattga 4406
Query: 780 agctggtgcagatatattgatgactattacatatcagaccagttttaaatcggtgagtga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4405 agctggtgcagatatattgatgactattacatatcagaccagttttaaatcggtgagtga 4346
Query: 840 gaacactccaataaggacccyagaagagtataacgggt 877
|||||||||||||||||||| |||||||||||||||||
Sbjct: 4345 gaacactccaataaggaccctagaagagtataacgggt 4308
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5997
Number of Sequences: 1807
Number of extensions: 5997
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)